Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMFIFKRKKQVEMPLEKIPAHIGIIMDGNGRWAKKRLKPRV-MGHKAGMDALQEVTIAASGLGVKVLTVYAFSTENWSRPDDEVKFIMNLPVEFFDKYVPELDKNNVRVQVIGDTHKLPKATYDAMQRACLRTKHNSGLVLNFALNYGGRSEITNAI-----KEIAQDVLEAKLNPDDITEDLVANHLMTNSLPYLYRDPDLIIRTSGELRLSNFLPWQSAYSEFYFTPVLWPDFKKDELHKAIVDYNQRHRRFGSV
2VG1 Chain:B ((3-228))----------------LPRHIAVLCDGNRRWARSAGYDDVSYGYRMGAAKIAEMLRWCHEAGIELATVYLLSTENLQRDPDELAALIEIITDVVEEICAP--ANHWSVRTVGDLGLIGEEPARRLRGAVESTPEVASFHVNVAVGYGGRREIVDAVRALLSKELANGATAEEL-VDAVTVEGISENLYTSGQP----DPDLVIRTSGEQRLSGFLLWQSAYSEMWFTEAHWPAFRHVDFLRALRDYSAR-------


General information:
TITO was launched using:
RESULT:

Template: 2VG1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -119186 for 1757 contacts (-67.8/contact) +
2D Compatibility (PS) -24148 + (NN) -14441 + (LL) 2644
1D Compatibility (HY) -16000 + (ID) 3950
Total energy: -175081.0 ( -99.65 by residue)
QMean score : 0.490

(partial model without unconserved sides chains):
PDB file : Tito_2VG1.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2VG1-query.scw
PDB file : Tito_Scwrl_2VG1.pdb: