Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNTPLYKALIQHARRNSHSFHVPGHHNGDVFFDDAKSIFDPLLTIDVTELAGLDDLHHPSGVIKEAQELASQLYGSA---ESFFLVNGTTVGNLAMILSVCEPGDTILV-QRNCHKSVF-HAVDLSGAEPVYLAPDVDSAMHVPTHVPLGTIKEALEAYPDAKGLVLTNPT-YYGHSADLTEIITEAHHYGIPVLVDEAHGAHFILGEPFPVSALKMGADIVVQSAHKTLPAMTMGSYLHLNSSCRINRDRVAEYL-----------------NRLQSSSPSYPIMASLDIARAYVQHIIE-EQKLSDILQRIETLKQTFDSLTNAEAVNPANPLIITDPLKLTIRSKRG--HSGYTLQSILERANIFTELAD---ENQVLLVLPLGGKRRINAEIIRSIDEEIEKTPPDQTFVSAEWGVQPVTVLPYPKKVLHSFKKEYVSFEEAAGRLNAEDIIPYPPGIPMIMAGERITKESVQKLSRLISMKTHVQGNMKIKEKQLLVYIEEEKS |
1M32 Chain:A ((36-363)) | -----------------------------------------------------------IGVVEQIRQQLTALATASEGYTSVLLQGSGSYAVEAVLGSALGPQDKVLIVSNGAYGARMVEMAGLMGIAHHAYDCGEV------ARPDVQAIDAILNADPTISHIAMVHSETTTGMLNPIDEVGALAHRYGKTYIVDAMSSFGG-IPMD---I-AALHIDYLISSANKCIQGVPGFAFVIAREQ-KL--AACKGHSRSLSLDLYAQWRCMEDNHGKWRFTSPTHTVLAFAQALKELAKEGGVAARHQRYQQNQRSLVAGMRAL-GFNTLLDDELH---SPIITAFYSPEDPQYRFSEFYRRLKEQGFVIYPGKVSQSDCFRIGNIGEVYAADITALLTAIRTAMY-------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1M32.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -140917 for 2426 contacts (-58.1/contact) +
2D Compatibility (PS) -32707 + (NN) -10333 + (LL) 12044
1D Compatibility (HY) -5200 + (ID) 1800
Total energy: -178913.0 ( -73.75 by residue)
QMean score : 0.528
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