Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAISWKEMNELQPRVMKLLYNSIEKDRLSHAYLFEGKKGTGKLDAALLLAKSFFCLEGGAEPCESCRNCKRIESGNHPDLHLVQPDGLSIKKAQI-QALQEEFSKTGLE-SHKKLYIISHADQMTANAANSLLKFLEEPNKDTMAVLITEQPQRLLDTIISRCQTLPFQPLQPKAIEDRLIE----QD--VSPHMARL---LANMTNNVAEAVELSRN-DEFAE-------SRAKVIK------------LYEVLHQRKGH-AFFFIQDQWMPFFK-EKTHQEMGLDMLLLIYRDVLSIQIGNEDKLIYQDLFQSIKQHALQSTQQSVTNQILAVLEAKKRLHSNVNVQGLMEHLVLMLQEG |
| 1SXJ Chain:C ((21-329)) | -PETLDEVY-GQNEVITTVRKFVDEGKLPH-LLFYGPPGTGKTSTIVALAREIYGKNYS------------------NMVLELNAS-DDRGIDVVRNQIKDFASTRQIFSKGFKLIILDEADAMTNAAQNALRRVIERYTKNTRFCVLANYAHKLTPALLSQCTRFRFQPLPQEAIERRIANVLVHEKLKLSPNAEKALIELS--NGDMRRVLNVLQSCKATLDNPDEDEISDDVIYECCGAPRPSDLKAVLKSILE-DDWGTAHYTLNKVR---SAKGLALIDLIEGIVKILEDYE------------------------LQNEETRVHLLTKLADIEYSISKGGNDQIQGSAVIGAIKA- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1SXJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -150030 for 1957 contacts (-76.7/contact) +
2D Compatibility (PS) -30686 + (NN) -21700 + (LL) 3080
1D Compatibility (HY) -10400 + (ID) 2350
Total energy: -212086.0 ( -108.37 by residue)
QMean score : 0.558
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