Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTKAVHTKHAPAAIGPYSQGIIVNNMFYSSGQIPLTPSGEMVNGDIKEQTHQVFSNLKAVLEEAGASFETVVKATVFIADMEQFAEVNEVYGQYFDTHKPARSCVEVARLPKDALVEIEVIALVK
3QUW Chain:A ((20-144))
TLTPVSTKLAPPAAASYSQAMKANNFVYVSGQIPYTPDNKPVQGSISEKAEQVFQNVKNILAESNSSLDNIVKVNVFLADMKNFAEFNSVYAKHFHTHKPARSCVGVASLPLNVDLEMEVIAVEK
General information:
TITO was launched using:
RESULT:
Template:
3QUW.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -68136 for 947 contacts (-71.9/contact) +
2D Compatibility (PS) -13647 + (NN) -5620 + (LL) 0
1D Compatibility (HY) -11200 + (ID) 3200
Total energy: -101803.0 ( -107.50 by residue)
QMean score : 0.611
(partial model without unconserved sides chains):
PDB file :
Tito_3QUW.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3QUW-query.scw
PDB file :
Tito_Scwrl_3QUW.pdb
: