Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MMKHDIEKVLISEEEIQKKVKELGAELTSEYQD------TFPLA-IGVLKGALPFMADLIKHIDTY---LEMDFMDVSSYGNSTVSSGEVKIIKDLDTSVEGRDILIIEDIIDSGLTLSYLVELFRYRKAKSIKIVTLLDKPSGRKADIKADFVGFEVPDAFVVGYGLDYAERYRNLPYIGVLKPAVYES
1P19 Chain:B ((9-190))
------EKILFTEEEIRTRIKEVAKRIADDYKGKGLRPYVNPLVLISVLKGSFMFTADLCRALCDFNVPVRMEFICVS------------RMLLDTRHSIEGHHVLIVEDIVDTALTLNYLYHMYFTRRPASLKTVVLLDKREGRRVPFSADYVVANIPNAFVIGYGLDYDDTYRELRDIVVLRPEVY--
General information:
TITO was launched using:
RESULT:
Template:
1P19.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -133887 for 1231 contacts (-108.8/contact) +
2D Compatibility (PS) -17004 + (NN) -2603 + (LL) 824
1D Compatibility (HY) -21200 + (ID) 3600
Total energy: -177470.0 ( -144.17 by residue)
QMean score : 0.493
(partial model without unconserved sides chains):
PDB file :
Tito_1P19.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1P19-query.scw
PDB file :
Tito_Scwrl_1P19.pdb
: