Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence---MTTDIIKTILLVIVIIAAAAVGL----IKGDFFSADQKTSQTKE-YDETMAFPSDRYPETAKHIKDAINEGH-SEVCTIDRDGAEERREQSLKDVPSKKGYDRDEWP--------------------------MAMCKEG-GEGASVEY-ISPADNRG-----------AGSWVGHRLTDYPDGTK-VLFTIQ--------
3KOS Chain:A ((11-210))QEKLKIGVVGTFAIGCLFPLLSDFKRSYPHIDLHISTHNNRVDPAAEGLDYTIRYGGGAWHD---TDAQYLCSALMSPLCSPTLA-SQIQTPADILKFPLLRSYRRDEWALWMQTVGEAPPSPTHNVMVFDSSVTMLEAAQAGMGVAIAPVRMFTHLLSSERIVQPFLTQIDLGSYWITRLQSRPETPAMREFSRWLTGVLHKT


General information:
TITO was launched using:
RESULT:

Template: 3KOS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 594 -49039 -82.56 -342.93
target 2D structure prediction score : 0.28
Monomeric hydrophicity matching model chain A : 0.62

3D Compatibility (PKB) : -82.56
2D Compatibility (Sec. Struct. Predict.) : 0.28
1D Compatibility (Hydrophobicity) : 0.62
QMean score : 0.178

(partial model without unconserved sides chains):
PDB file : Tito_3KOS.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3KOS-query.scw
PDB file : Tito_Scwrl_3KOS.pdb: