Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKKITTNEQF-NELIQSDKEIIVKFYADWCPDCTRMNMFIGDILEEY-NQNDWYELNKDELPDLAEKYQVMGIPSLLIFKNGEKTAHLHSANAKTPEEVTEFLSEHIS
2YJ7 Chain:A ((6-106))----VTDENFEQEVLKSDKPVLVDFWAPWCGPCRMIAPIIEELAKEYEGKVKVVKVNVDENPNTAAQYGIRSIPTLLLFKNGQVVDRLVGAQPK--EALKERIDKHL-


General information:
TITO was launched using:
RESULT:

Template: 2YJ7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 414 -58576 -141.49 -591.67
target 2D structure prediction score : 0.60
Monomeric hydrophicity matching model chain A : 0.81

3D Compatibility (PKB) : -141.49
2D Compatibility (Sec. Struct. Predict.) : 0.60
1D Compatibility (Hydrophobicity) : 0.81
QMean score : 0.525

(partial model without unconserved sides chains):
PDB file : Tito_2YJ7.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2YJ7-query.scw
PDB file : Tito_Scwrl_2YJ7.pdb: