Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMYGGKSAEHNVSLQTALAVIKALNTEKFDIHPIYITEKGEWVRGARLTEPVSNVKMLQFEQGGSAFSPAALNQEMFPQEASQQNEAIDVVFPLLHGPNGEDGTIQGMLELLNIPYVGNGVLASSAGMDKVVMKHLFAQVGLAQAKYAAFLKKDW-TRSPKESCEEVEQELGYPCFVKPANLGSSVGISKCRNREELQKAFELAFQYDRKVVVEEGINGREIEIGVLGNDDPKCSVVGEIAPKTDFYDYKAKYEDGDTDLMIPAIVTDEEYATISDMAIKAFKAIDGSGLVRADFFLTADGEVLINEVNTMPGFTPFSMFPLLWKEAGVEYADLIEQLVELAKERHAEKQLIKHTF
5BPH Chain:D ((8-305))LLGGTSAEREVSLLSGQAVLAGLKEAGIDAYGVDTKDF-----------PVTQLK----EQG------------------------FDKVFIALHGRGGEDGTLQGVLEFLQLPYTGSGVMASALTMDKLRTKLVWQALGLPISPYVALNRQQFETLSPEELVACVAK-LGLPLIVKPSHE-SSVGMSKVDHASELQKALVEAFQHDSDVLIEKWLSGPEFTVAILG-DEVLPSI--RIQPPGVFYDYDAK--SDKTQYFCPSGLSDESEQQLAALALQAYHALDCSGWGRVDVMQDRDGHFYLLEVNTSPGMTSHSLVPMAARQYGLSFSQLVARILMLA--------------


General information:
TITO was launched using:
RESULT:

Template: 5BPH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain D - contact count / total energy / energy per contact / energy per residue : 1598 -166981 -104.49 -567.96
target 2D structure prediction score : 0.68
Monomeric hydrophicity matching model chain D : 0.79

3D Compatibility (PKB) : -104.49
2D Compatibility (Sec. Struct. Predict.) : 0.68
1D Compatibility (Hydrophobicity) : 0.79
QMean score : 0.527

(partial model without unconserved sides chains):
PDB file : Tito_5BPH.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5BPH-query.scw
PDB file : Tito_Scwrl_5BPH.pdb: