Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSHSQEKIALITGASSQGDIGTAICRKLASQGIHIFFTHWNSDTAWIEEFQQEILRMGVRCEAMKIDLSDAHAAFTIHEKISDKLGYPSILINNAAHSASDNYVSLDAKSLDEHYAVNMRSNFLLCVEFARRFKKSNLISGRIINMTSGQDLGPL--PGELAYAATKGAISAFTRSLSQELAPLGITVNAVNPGPTDSTWMTDEI----RNFLSPKFPMGRIGTPDDAARMIAFLASDEAEWITGQIIHSEGGFIRG
4BO4 Chain:B ((26-266))----QGKVALVTGASR--GIGQAIALELGRLGAVVIGTATSASGA--EKIAETLKANGVEGAGLVLDVSSDESVAATLEHIQQHLGQPLIVVNNA-------------DEWFDVVNTNLNSLYRLSKAVLRGMTKARW--GRIINI--GSVVGAMGNAGQTNYAAAKAGLEGFTRALAREVGSRAITVNAVAPGFID-TDMTRELPEAQREALLGQIPLGRLGQAEEIAKVVGFLASDGAAYVTGATVPVNGGM---


General information:
TITO was launched using:
RESULT:

Template: 4BO4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 1179 -146580 -124.33 -660.27
target 2D structure prediction score : 0.72
Monomeric hydrophicity matching model chain B : 0.78

3D Compatibility (PKB) : -124.33
2D Compatibility (Sec. Struct. Predict.) : 0.72
1D Compatibility (Hydrophobicity) : 0.78
QMean score : 0.613

(partial model without unconserved sides chains):
PDB file : Tito_4BO4.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4BO4-query.scw
PDB file : Tito_Scwrl_4BO4.pdb: