Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software) Input alignment information: Query sequence MKKLYGVIGNPIGHSMSPDIHNASL----KDLGLDGHYHAFKVEENDLEDAVKG-IRALGVQGINVTVPHKVSIMDYLDHIDESAKVLGAVNTVRREGDKLVGYNTDGEGFVKSLMKVLDKPISELSFLMIGAGGAARAIFTTIVRNTPKKFDICNRT---LEKAKRLTEATPSFHNKEVLSIKEAEERLEQYDVIIHTTSVGMYPNVDDVPLSLQRAASSAVVCDIVYN---PIQTALLKEASQKGLKTLDGVGMFVEQAALSFQLWTGQE----PNIEKMRSIVIGKLGGTEC 4FQ8 Chain:A ((4-263)) --KSFGVFGNPIKHSKSPLIHNACFLTFQKELRFLGHYHPILL---PLESHIKSEFLHLGLSGANVTLPFKERAFQVCDKIKGIALECGAVNTLVLENDELVGYNTDALGFYLSL-----KQKNYQNALILGAGGSAKAL-ACELKKQGLQVSVLNRSSRGLDFFQRL--GCDCF----------MEPPKSAFDLIINATSASLH---NELPLNKEVLKGYFKEGKLAYDLAAGFLTPFLSLAKELKTPFQDGKDMLIYQAALSFEKFSASQIPYSKAFEVMRSVF---------

General information: TITO was launched using: RESULT: Template: 4FQ8.pdb Alignment : align.pir Tito was launched with SMD and SCWRL Tito text output Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1421 40067 28.20 163.54 target 2D structure prediction score : 0.47 Monomeric hydrophicity matching model chain A : 0.73 3D Compatibility (PKB) : 28.20 2D Compatibility (Sec. Struct. Predict.) : 0.47 1D Compatibility (Hydrophobicity) : 0.73 QMean score : 0.484

(partial model without unconserved sides chains): PDB file : Tito_4FQ8.pdb: (Unconserved sides chains are recalculated) : Sequence: align-4FQ8-query.scw PDB file : Tito_Scwrl_4FQ8.pdb: