Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKILVTGAAGFIGSHLCEELLKDKKHNVIGIDDFIGPTPFSLKLKNLKNLLPEKRFTFIKENLLTADLASLLEGVDVIFHLAAIPGVRSSWGNHFHPYAAHNIQALQRLLEACREHSIQTFVFASTSSVYGEKQGK-VSENTSLSPLSPYGVTKLTGEKLCHVYKQSFGIPIVILRFFTVYGPRQRPDMAFHRLIKQHLQQ-KPLTIFGDGQQSRDFTYISDCVKGITAVLGKPH---LIGETVNIGGAERASVLKVVSLIEDISGRKATLHF-SDKIAGEPSNTWADISKAKQLLHYDPATSLKDGLTNEIAYLSSLYQGE
3KO8 Chain:A ((1-310))MRIVVTGGAGFIGSHLVDKLVEL-GYEVVVVDNLSSGRR---E-------FVNPSAELHVRDLKDYSWGAG-IKGDVVFHFAANPEVRLSTTE-PIVHFNENVVATFNVLEWARQTGVRTVVFASSSTVYGDADVIPTPEEEPYKPISVYGAAKAAGEVMCATYARLFGVRCLAVRYANVVGPRLRHG-VIYDFIMKLRRNPNVLEVL----QRKSYLYVRDAVEATLAAWKKFEEMDAPFLALNVGNVDAVRVLDIAQIVAEVLGLRP-EIRLV----GDVKYMTLAVTKLMKLTGWRPTMTSAEAVKKTAEDLAKEL---


General information:
TITO was launched using:
RESULT:

Template: 3KO8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1762 -101875 -57.82 -351.29
target 2D structure prediction score : 0.60
Monomeric hydrophicity matching model chain A : 0.74

3D Compatibility (PKB) : -57.82
2D Compatibility (Sec. Struct. Predict.) : 0.60
1D Compatibility (Hydrophobicity) : 0.74
QMean score : 0.491

(partial model without unconserved sides chains):
PDB file : Tito_3KO8.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3KO8-query.scw
PDB file : Tito_Scwrl_3KO8.pdb: