Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNVLQTTNLSKTYYSNKGTISYQALSAFDLSVSKGEFVGIMGPSGSGKTTLLNLLATIDKPTQGEMMINGIQPKTLKDQELALFRRRELGFVFQDFNLLDTLTIRENI-LLPLALDKVKLREMEARLDELADTLQIKHILDHRTYEVSGGQQQRAACARAIIHNPALILADEPTGNLDSKSAKQVMNTLAQLNEEKEATILLVTHD-ATAASFCKRIVFIKDGRFFSEIHRGTNRQVFYQSILDTLSVLGGDFHEFENYRP
2Q0H Chain:A ((36-240))--------------------SLEVLKGINVHIREGEVVVVIGPSGSGKSTFLRCLNLLEDFDEGEIIIDGINLKA-KDTNLNKVRE-EVGMVFQRFNLFPHMTVLNNITLAPMKVRKWPREKAEAKAMELLDKVGLKDKAHAYPDSLSGGQAQRVAIARALAMEPKIMLFDEPTSALDPEMVGEVLSVMKQLANEG-MTMVVVTHEMGFAREVGDRVLFMDGGYIIEE---------------------------------


General information:
TITO was launched using:
RESULT:

Template: 2Q0H.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 984 -54198 -55.08 -266.98
target 2D structure prediction score : 0.63
Monomeric hydrophicity matching model chain A : 0.76

3D Compatibility (PKB) : -55.08
2D Compatibility (Sec. Struct. Predict.) : 0.63
1D Compatibility (Hydrophobicity) : 0.76
QMean score : 0.517

(partial model without unconserved sides chains):
PDB file : Tito_2Q0H.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2Q0H-query.scw
PDB file : Tito_Scwrl_2Q0H.pdb: