Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLRRMGDASLTTELGRVLVTGGAGFVGANLVTTLLDRGHWVRSFDRAPSLLPA--------HPQLEVLQGDITDADVCAAAVD--GIDTIFHTAAIIELMGGASVTDEYRQRSFAVNVGGTENLLHAGQRA-GVQRFVYTSSNSVVMGGQNIAGGDETLPYTDRFNDLYTETKVVAERFVLAQNGVDGMLTCAIRPSGIWGNGDQT-----MFRKLFESVLKGHV-KVLVGRKSARLDNSYVHNLIHGFILAAAHLVPDGTAPGQAYFINDAEPINMFEFARPVLEACGQRWPKMRISGPAVRWVMTGWQRLHFRFGFPAPLLEPLAVERLYLDNYFSIAKARRDLGYEPLFTTQQALTECLPYYVSLFEQMKNEARAEKTAATVKP |
| 1RPN Chain:A ((15-333)) | --------------RSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRELGIEGDIQYEDGDMADACSVQRAVIKAQPQEVYNLAAQSFVGASW----NQPVTTGVVDGLGVTHLLEAIRQFSPETRFYQASTSEMFGLIQA-ERQDENTPFY--PRSPYGVAKLYGHWITVNYRESFGLHASSGILFNHESPLRGIEFVTRKVTDAVARIKLGKQQELRLGNVDAKRDWGFAGDYVEAMWLMLQQ-----D-KADDYVVATGVTTTVRDMCQIAFEHVGLDYRDF-LKID--PA-----------------FFR----PAEVDVLLGNPAKAQRVLGWKPRTSLDELIRMMVEADLRRVS----------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1RPN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -186350 for 2768 contacts (-67.3/contact) +
2D Compatibility (PS) -31829 + (NN) -12291 + (LL) 5064
1D Compatibility (HY) -4800 + (ID) 2550
Total energy: -232756.0 ( -84.09 by residue)
QMean score : 0.446
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