Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MEGFAGKVAVVTGAGSGIGQALAIELARSGAKVAISDVDTDGLADT----EHRLKAISTPVKTDRLDVTEREAFLAYADAVNEHFGTVNQIYNNAGIAFTGDIEVSQFKDIERVMDVDFWGVVNGTKAFLPHLIASGD-GHVINISSVFGLFSAPG-QAAYNSAKFAVRGFTEALRQEMALAGHPVKVTTVHPGGVKTAIARNAT-------AAEGLDQAELAETFDKRVA---HLSPQRAAQIILTGVAKNKARVLVGVDAKVLDLVVRLTGSGYQRIFPIITGRLIPRPR |
| 4YAG Chain:B ((3-249)) | ---IAGTTAFITGGASGIGFGIAQRLLANGARLVLADIRQDHLDEARQFFEERQQGRN--VHTIRLDVSDRAQMAEAARECEAVMGGPDILINNAGIDPSGPFKDATYQDWDYGLAINLMGPINGIMAFTPGMRARGRGGHIVNTASLAGLTPMPSFMAIYATAKAAVITLTETIRDSMAEDN--IGVTVLMPGPIKSRIHESGQNRPERFRAGSGL--AETEQQLAKRVVADNWMEPTEVGDMIVDAIVHNKLYV------------------------------------ |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4YAG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -74030 for 2000 contacts (-37.0/contact) +
2D Compatibility (PS) -25001 + (NN) -8569 + (LL) 2524
1D Compatibility (HY) -13200 + (ID) 3950
Total energy: -122226.0 ( -61.11 by residue)
QMean score : 0.512
|
|
|