Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MRRKVRRLTLAVSALVALFPAVAGCSDSGDNKPGATIPSTPANAEGRHGPFFPQCGGVSDQTVTELTRVTG-LVNTAKNSVGCQWLAGGGILGPHFSFSWYRG--SPIGRERKTEELSRASVEDINIDGHSGFIAIGNEPSLGDSLCEVGIQFSDDFIEWSVSFSQKPFPLPCDIAKELTRQSIANSK |
1TUJ Chain:A ((1-123)) | ----IDQDTVVAKYMEYLMPDIMPCADELHISED--IATNIQAA--KNGADMSQLGCLKACVMKRIEMLKGTELYVEPVYKMIEVVHAGNADDIQLVKGIANECIENAKGETDECNIGNKYTDCYIEKLFS--------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1TUJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) 7704 for 884 contacts (8.7/contact) +
2D Compatibility (PS) -12428 + (NN) -2993 + (LL) 3456
1D Compatibility (HY) -3600 + (ID) 700
Total energy: -8561.0 ( -9.68 by residue)
QMean score : 0.096
|
|
|