Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNSPLAPVGVFDSGVGGLTVARAIIDQLPDEDIVYVGDTGNGPYGPLTIPEIRAHALAIGDDLVGRGVKALVIACNSASSACLRDARERYQVPVVEVILPAVRRAVAATRNGRIGVIGTRATITSHAYQDAFAAARDTEITAVACPRFVDFVERGVTSGRQVLGLAQGYLEPLQRAEVDTLVLGCTHYPLLSGLIQLAMGENVTLVSSAEETAKEVVRVLTEIDLLRPHDAPPATRIFEATGDPEAFTKLAARFLGPVLGGVQPVHPSRIH
1B74 Chain:A ((1-252))
-----MKIGIFDSGVGGLTVLKAIRNRYRKVDIVYLGDTARVPYGIRSKDTIIRYSLECAGFLKDKGVDIIVVACNTASAYALERLKKEINVPVFGVIEPGVKEALKKSRNKKIGVIGTPATVKSGAYQRKLEE-GGADVFAKACPLFAPLAEEGLLEGEITRKVVEHYLKEFKG-KIDTLILGCTHYPLLKKEIKKFLG-DAEVVDSSEALSLSLHNFIK--------DDGSSSLELFFTDLSPNLQFLIKLILGRDYP-VKLAEGVF--
General information:
TITO was launched using:
RESULT:
Template:
1B74.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -215230 for 2169 contacts (-99.2/contact) +
2D Compatibility (PS) -27750 + (NN) -12957 + (LL) 1192
1D Compatibility (HY) -20000 + (ID) 4500
Total energy: -279245.0 ( -128.74 by residue)
QMean score : 0.560
(partial model without unconserved sides chains):
PDB file :
Tito_1B74.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1B74-query.scw
PDB file :
Tito_Scwrl_1B74.pdb
: