Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKAIFITGAGSGMGREGATLFHANGWRVGAIDRNEDGLAAL---RVQLGAERLWARAVDVTDKAALEGALADFCAGNVGGGLDMM-WNNAGIGEGGWFEDVPYEAAVRVVDVNFKAVLTGAYAALPYLKKAPGSLMFSTSSSSGTYGMPRIAVYSATKHAVKGLTEALSVEWQRHGVRVADVLP--GLIDTAILTSTRQHSDEGPYTISAEQIRAAAPKKGMFRLMPSSSVAEAAWRAYQHPTRLHWYVPRSIRWIDRLKGVSPEFVRRHIAKSLATLEPKRK |
| 1Y5R Chain:A ((19-204)) | -KKVIVTGASKGIGREMAYHLSKMGAHVVLTARSEEGLQKVVSRCLELGAASAHYIAGTMEDMTFAEQFIVK--AGKLMGGLDMLILNHITQTSLSLFHD-DIHSVRRVMEVNFLSYVVMSTAALPMLKQSNGSIAV-ISSLAGKMTQPMIAPYSASKFALDGFFSTIRTELYITKVNVSITLCVLGLIDT-------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1Y5R.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -69461 for 1432 contacts (-48.5/contact) +
2D Compatibility (PS) -19362 + (NN) -10269 + (LL) 7516
1D Compatibility (HY) -11200 + (ID) 3250
Total energy: -106026.0 ( -74.04 by residue)
QMean score : 0.345
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