Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MCCAVCGPEPGRIGEVTPLGPCPAQHRGGPLRPSELAQASVMAALCAVTAIISVVVPFAAGLALLGTVPTGLLAYRYRLRVLAAATVAAGMIAFLIAGLGGFMGVVHSAYIGGLTGIVKRRGRGTPTVVVSSLIGGFVFGAAMVGMLAAMVRLRHLIFKVMTANVDGIAATLARMHMQGAAADVKRYFAEGLQYWPWVLLGYFNIGIMIVSLIGWWALSRLLERMRGIPDVHKLDPPPGDDVDALIGPVPVRLDKVRFRYPRAGQDALREVSLDVRAGEHLAIIGANGSGKTTLMLILAGRAPTSGTVDRPGTVGLGKLGGTAVVLQHPESQVLGTRVADDVVWGLPLGTTADVGRLLSEVGLEA-LAERDTGSLSGGELQRLALAAALARE--PAMLIADEVTTMVDQQGRDALLAVLSGLTQRHRTALVHITHYDNEADSADRTLSL------SDSPDNTDM--VHTA---AMPA----PV----IGVDQPQHAPALELVGVGHEYASGTPWAKTALRDINFVVEQGDGVLIHGGNGSGKSTLAWI-MAGLTIP----TTGACLL-------------DGRPTHE-----QVGAVALSFQAARLQ----------------------------------------------------------------LMRSRVDLEVASAA----GF-SA-SEQDRVAAALTVVGLDPALGARRIDQLSGGQMRRVVLAGLLARAP---RALILDEPLAGLDAASQRGLLRLLEDLRRARGLTVVVVSHDFAGMEELCPRTLHL------RDGVLESAAASEAGGMS |
| 2VF7 Chain:A ((362-824)) | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VLLHLGLGYLGLDRSTPTLSPGELQRLRLATQLYSNLFGVVYVLDEPSAGLHPADTEALLSALENLKR-GGNSLFVVEHDLDVIRRADWLVDVGPEAGEKGGEILYSGPPEGLKHVPESQTGQYLFADRHTEPHTPREPAGWLELNGVT----------RNNLDNLDVRFPLGVMTSVTGVSGSGKSTLVSQALVDALAAHFGQ--GSARLGGDLAQITRLVRVDQKPIGRTPRSNMATYTGLFDQVRKLFAATPLAKKRGYNAGRFSFNVKGGRCEHCQGEGWVMVELLFLPSVYAPCPVCHGTRYNAETLEVEYRGKNIADVLALTVDEAHDFFADESAIFRALDTLREVGLGYLRLGQPATELSGGEAQRIKLATELRRSGRGGTVYVLDEPTTGLHPADVERLQRQLVKLVDA-GNTVIAVEHKMQVVA-ASDWVLDIGPGAGEDGGRLVAQGTPAE---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2VF7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -125205 for 2375 contacts (-52.7/contact) +
2D Compatibility (PS) -34700 + (NN) -8554 + (LL) 24384
1D Compatibility (HY) -8000 + (ID) 4350
Total energy: -156425.0 ( -65.86 by residue)
QMean score : 0.351
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