Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTRIIGGVAGGRRIAVPPRGTRPTTDRVRESLFNIVTARRDLTGLAVLDLYAGSGALGLEALSR-GAASVLFVESDQRSAAVIARNIEALGLSGATLRRGAVAAVVAAGTTSPVDLVLADPPYNVDSADVDAILAALGTNGWTREGTVAVVERATTCAPLTWPEGWRRWPQRVYGDTRLELAERLFANV
3A27 Chain:A ((119-222))
------------------------------------------ENEVVVDMFAGIGYFTIPLAKYSKPKLVYAIEKNPTAYHYLCENIKLNKLNNVIPILADNRDVEL---KDVADRVIMGYVHK-----THKFLDKTFE--FLKDRGVIHYHETVA---------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3A27.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -71627 for 772 contacts (-92.8/contact) +
2D Compatibility (PS) -11583 + (NN) -8057 + (LL) 4744
1D Compatibility (HY) -3200 + (ID) 750
Total energy: -90473.0 ( -117.19 by residue)
QMean score : 0.497
(partial model without unconserved sides chains):
PDB file :
Tito_3A27.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3A27-query.scw
PDB file :
Tito_Scwrl_3A27.pdb
: