Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRGTDEKYGLPPQPDSDRMTRRTLPVLGLAHELITPTLRQMADRL-DPHMRPVVSYHLGWSDERGRPVNNNCGKAIRPALVFVAAEAAGADPHSAIPGAVSVELVHNFSLVHDDLMDRDEHRRHRPTVWALWGDAMALLAGDAMLSLAHEVLLDCDSPHVGAALRAISEATRELIRGQAADTAFESR------------TDVALDECLKMAEGKTAALMAASAEVGALLAGAPRSVREALVAYGRHIGLAFQLVDDLLGIWGRPEITGKPVYSDLRSRKKTLP-VTWTVAHGGSA-GRRLAAWLVDETGSQTASDDELAAVAELIECGGGRRWASAEARRHVTQGIDMVARIGIPDRPAAELQDLAHYIVDRQA |
| 4DHD Chain:A ((12-334)) | ----------------------------KYGAEVEKALVRYLSIGLAEDFREAVLYQ-----------VKTGGKRLRPLLTLAAAEAVSGQWRPALPAAAIVELIHNYSLIYDDIIDRGDVRRGLPTVRKAFGDNAAILVGIWYREAIEEAVLDTPK--PTLFAKEVAEVIKAIDEGERLDILFEAAGRSDPYFVQARWREVTLDDYIKMVSLKTGALIAAAAKWGVLSVSDDRGLAEAAWNFGMAAGVAFQIIDDVLDIYG-------EIGKDIKEHKRGNAVVAVALSHLGEGERRRLLEILARE----VVEEADVREAVALLDSVGAREEALRLAARYREEAERHLAKIPNN----GTLKELLDFIVAR-- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4DHD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -161375 for 2629 contacts (-61.4/contact) +
2D Compatibility (PS) -33336 + (NN) -22979 + (LL) 1360
1D Compatibility (HY) -14000 + (ID) 4750
Total energy: -235080.0 ( -89.42 by residue)
QMean score : 0.398
|
|
|