Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSPAPVQ------------VMGVLNVTDDSFSDGGCYLDLDDAVKHGLAMAAAGAGIVDVGGESSRPGATRVDPAVETSRVIPVVKELAAQGITVSIDTMRADVARAALQNGAQMVNDVSGGRADPAMGPLLAEADVPWVLMHWRAVSADTPHVPVRYGNVVAEVRADLLASVADAVA-AGVDPARLVLDPGLGFAK-TAQHNWAILHALPELV-----ATGIPVLVGASRKRFLGALLAGPDGVMRPTDGRDTATAVISALAALHGAWGVRVHDVRASVDAIKVVEAWMGAERIERDG |
| 2Y5S Chain:B ((8-292)) | --PAPLQCGRFELTFERPLVMGILNATP----------ARDDALRRAERMIAEGADLLDIGGESTRPGAPPVPLDEELARVIPLVEALRPLNVPLSIDTYKPAVMRAALAAGADLINDIWGFR-QPGAIDAVRDGNSGLCAMHMLGEPQTMQVGEPDYGDVVTDVR-DFLAARAQALRDAGVAAERICVDPGFGFGKAVVDDNYALLAALPDTAPARPDGRAYPILAGMSRKSMLGAVIGG-----KPPLERVAASVAAALCAVERGAAIVRVHDVAATVDALSVWNAVRAAAR----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2Y5S.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -157345 for 2157 contacts (-72.9/contact) +
2D Compatibility (PS) -28444 + (NN) -22860 + (LL) 544
1D Compatibility (HY) -17200 + (ID) 5450
Total energy: -230755.0 ( -106.98 by residue)
QMean score : 0.523
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