Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVAITHTPKLKHLDKLLAHCHRRRYTAKSTIIYAGDRCETLFFIIKGSVTILIEDDDGREMIIGYLNSGDFFGELGLFEKEGSEQERSAWVRAKVECEVAEISYAKFRELSQQDSEILYTLGSQMADRLRKTTRKVGDLAFLDVTGRVARTLLDLCQQPDAMTHPDGMQIKITRQEIGRIVGCSREMVGRVLKSLEEQGLVHVKGKTMVVFGTR
1RUO Chain:B ((11-209))
------------LEWFLSHCHIHKYPSKSTLIHQGEKAETLYYIVKGSVAVLIKDEEGKEMILSYLNQGDFIGELGLFE-EG--QERSAWVRAKTACEVAEISYKKFRQLIQVNPDILMRLSAQMARRLQVTSEKVGNLAFLDVTGRIAQTLLNLAKQPDAMTHPDGMQIKITRQEIGQIVGCSRFTVGRILKMLEDQNLISAHGKTIVVYGTR
General information:
TITO was launched using:
RESULT:
Template:
1RUO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -131550 for 1423 contacts (-92.4/contact) +
2D Compatibility (PS) -20819 + (NN) -1274 + (LL) 1244
1D Compatibility (HY) -24400 + (ID) 6700
Total energy: -183499.0 ( -128.95 by residue)
QMean score : 0.514
(partial model without unconserved sides chains):
PDB file :
Tito_1RUO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1RUO-query.scw
PDB file :
Tito_Scwrl_1RUO.pdb
: