Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MADREVGTVKWFNDAKGYGFIQRD-------S-GPDVFVHYRAIRGEGHRSLVEGQKVEFSVIQGQKGLQAEDVSKV
3TS2 Chain:A ((8-80))
--LHGAGICKWFNVRMGFGFLSMTARAGVALDPPVDVFVHQSKLHMEGFRSLKEGEAVEFTFKKSAKGLESIRVTGP
General information:
TITO was launched using:
RESULT:
Template:
3TS2.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -27033 for 438 contacts (-61.7/contact) +
2D Compatibility (PS) -6831 + (NN) 401 + (LL) 352
1D Compatibility (HY) -4800 + (ID) 1350
Total energy: -39261.0 ( -89.64 by residue)
QMean score : 0.652
(partial model without unconserved sides chains):
PDB file :
Tito_3TS2.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3TS2-query.scw
PDB file :
Tito_Scwrl_3TS2.pdb
: