Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMATQGVFTLPANTRFGVTAFANSSGTQTVNVLVNNETAATFSGQSTNNAVIGTQVLNSGSSGKVQVQVSVNGRPSDLVSAQVILTNELNFALVGSEDGTDNDYNDAVVVINWPLG
2VUD Chain:B ((1-114))-ATQGVFTLPANTRFGVTAFANSSGTQTVNVLVNNETAATFSGQSTNNAVIGTQVLNSGSSGKVQVQVSVNGRPSDLVSAQVILTNELNFALVGSEDGTDNDYNDAVVVINWPLG


General information:
TITO was launched using:
RESULT:

Template: 2VUD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		3D Compatibility (PKB) -42664 for 818 contacts (-52.2/contact) +
2D Compatibility (PS) -12943 + (NN) -11446 + (LL) 208
1D Compatibility (HY) -14000 + (ID) 5700
Total energy: -86545.0 ( -105.80 by residue)
QMean score : 0.675

(partial model without unconserved sides chains):
PDB file : Tito_2VUD.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2VUD-query.scw
PDB file : Tito_Scwrl_2VUD.pdb: