Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRIGHGYDVHRFGEGDFITLGGVRIPHKHGLVAHSDGDVLLHALSDALLGAAALGDIGKHFPDTDPRFKGADSRALLRHVVAIVAEKGWKVGNVDATIVAQAPKMAPHIETMRGLIAEDLGVAVDQVNVKATTTERLGFTGREEGIAVHAVALLMAR
3P0Z Chain:A ((24-178))
FRIGQGYDVHQLVPGRPLIIGGVTIPYERGLLGHSDADVLLHAITDALFGAAALGDIGRHFSDTDPRFKGADSRALLRECASRVAQAGFAIRNVDSTIIAQAPKLAPHIDAMRANIAADLDLPLDRVNVKAKTNEKLGYLGRGEGIEAQAAALVV--
General information:
TITO was launched using:
RESULT:
Template:
3P0Z.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -130119 for 1305 contacts (-99.7/contact) +
2D Compatibility (PS) -16872 + (NN) -10953 + (LL) 244
1D Compatibility (HY) -15600 + (ID) 4800
Total energy: -178100.0 ( -136.48 by residue)
QMean score : 0.563
(partial model without unconserved sides chains):
PDB file :
Tito_3P0Z.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3P0Z-query.scw
PDB file :
Tito_Scwrl_3P0Z.pdb
: