Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAQKIVRVGDIQIGNDLPFVLFGGMNVLESRDLAMQVCEEYVRVTEKLGIPYVFKASFDKANRSSIHSFRGPGLEEGMKIFEEIKKTFKVPVITDVHEPFQAQPVAEVCDIIQLPAFLSRQTDLVVAMARTNAVINIKKAQFLAPQEMKHILTKCEEAGNDRLILCERGSSFGYNNLVVDMLGFGIMKQF--EYPVFFDVTHALQMPGGRADSAGGRRAQVTDLAKAGLSQKLAGLFLEAHPDPEHAKCDGPCALRLNKLEAFLSQLKQLDELIKSFPAIETA
3STF Chain:B ((3-277))
-----IKINDITLGNNSPFVLFGGINVLESLDSTLQTCAHYVEVTRKLGIPYIFKASFDKANRSSIHSYRGVGLEEGLKIFEKVKAEFGIPVITDVHEPHQCQPVAEVCDVIQLPAFLARQTDLVVAMAKTGNVVNIKKPQFLSPSQMKNIVEKFHEAGNGKLILCERGSSFGYDNLVVDMLGFGVMKQTCGNLPVIFDVTHSLQ----------GRRAQALDLALAGMATRLAGLFLESH-----------------LLEDFLIRIKALDDLIKSQPIL---
General information:
TITO was launched using:
RESULT:
Template:
3STF.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -166443 for 2037 contacts (-81.7/contact) +
2D Compatibility (PS) -27416 + (NN) -15808 + (LL) 1116
1D Compatibility (HY) -32800 + (ID) 8700
Total energy: -250051.0 ( -122.75 by residue)
QMean score : 0.599
(partial model without unconserved sides chains):
PDB file :
Tito_3STF.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3STF-query.scw
PDB file :
Tito_Scwrl_3STF.pdb
: