Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRVILLGAPGAGKGTQARFITEKFGIPQISTGDMLRAAVKAGSPLGQQVKGVMDSGGLVSDDIIIALIKERITEADCAKGFLFDGFPRTIPQAEALKDA----GVTIDHVVEIAVDDEEIVSRIAGRRVHPASGRVYHTEHNPPKVAGKDDVTGEELIQREDDKEETVRHRLSVYHSQTKPLVDFYQKLSAAEGTPKYHSIAGVGSVEQITAKVLSALS
4MKF Chain:A ((1-188))
MNLVLMGLPGAGKGTQGEKIVEDYGIPHISTGDMFRAAMKEETPLGLEAKSYIDKGELVPDEVTIGIVKERLGKDDCERGFLLDGFPRTVAQAEALEEILEEYGKPIDYVINIEVRKDVLMERLTGRRICSVCGTTYHLVFNPPKTPGICDKDGGELYQRADDNEETVSKRLEVNMKQMQPLLDFYSE-------------------------------
General information:
TITO was launched using:
RESULT:
Template:
4MKF.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -67558 for 1369 contacts (-49.3/contact) +
2D Compatibility (PS) -20057 + (NN) -10026 + (LL) 2132
1D Compatibility (HY) -16000 + (ID) 4700
Total energy: -116209.0 ( -84.89 by residue)
QMean score : 0.568
(partial model without unconserved sides chains):
PDB file :
Tito_4MKF.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4MKF-query.scw
PDB file :
Tito_Scwrl_4MKF.pdb
: