Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIAAYQARCQARVDAALDALFVAPREELQRLYEAMRYSVMNGGKRVRPLLAYAACEALGGAPQRADAAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHRAFDEATAILAADGLQALAFEVLADTRRNP---QEHAVCL------EMLTRLARAAGSAGMVGGQAIDLGSVGVALDQAALEVMHRHKTGALIEASVRLGALASGRAEPASLAALERYAEAIGLAFQVQDDILDVESDTATLGKTQGKDQAHNKPTYPALLGLEAAKGYALELRDLALAALDGFPPSADPLRQLARYIVERRN |
| 4GP2 Chain:B ((35-249)) | --------------------------------EAVLYQVKTGGKRLRPLLTLAAAEAVSGQWRPALPAAAIVELIHNYSLIYDDI--IDRGDVRRGLPTVRKAFGDNAAILVGIWYREAIEEAVLDTPKPTLFAKEVAEVIKAIDEGERLDILFEAAGRSDPYFVQA---RWREVTLDDYI--KMVSLKTGALIAAAAKWGVLSVSDDRGLAEAAWN-FGMAAGVAFQIIDDVLDIYGD------EIGKDIKEHK------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4GP2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -33788 for 1495 contacts (-22.6/contact) +
2D Compatibility (PS) -22332 + (NN) -20327 + (LL) 8060
1D Compatibility (HY) -11200 + (ID) 4150
Total energy: -83737.0 ( -56.01 by residue)
QMean score : 0.322
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