Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIQRVYVALGSNLAEPREQIQAALDAFERLPETRLVAVSPLYISDPLGPADQP-RFVNGVAALDTNLAPLDLLDALQAIELEQGRVRDLRWGPRTLDLDILLFGEQLLDLPRLKVPHYHMQARAFVLYPLADLAPDLRLPDGRHLPELLAACPFEGIERLPGA
3MCO Chain:B ((21-181))
MVQYI-IGIGTNSGFTIENIHLAITALESQQNIRIIRKASLYSSKAV------IRFLNTAVKISSSLKPDELLVLLKDIELKI----------RVIDLDILAAEDLILETDKLTIPHKELINRSFALAPL------LELSKGWHHPK----------------
General information:
TITO was launched using:
RESULT:
Template:
3MCO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -90947 for 940 contacts (-96.8/contact) +
2D Compatibility (PS) -12856 + (NN) -5452 + (LL) 1300
1D Compatibility (HY) -9200 + (ID) 2200
Total energy: -119355.0 ( -126.97 by residue)
QMean score : 0.561
(partial model without unconserved sides chains):
PDB file :
Tito_3MCO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3MCO-query.scw
PDB file :
Tito_Scwrl_3MCO.pdb
: