Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSMADRDGVIWYDGELVQWRDATTHVLTHTLHYGMGVFEGVRAYDTPQGTAI-FRLQAHTDRLFDSAHIMNMQIPYSRDEIN-EATRA--AVRENNL------ESAYIRPMVFYGSEGMGLRASGLKVHVIIAAWSWGAYMGEEALQQGIKVRTSSFTRHHVNIS---MTRAKSNGAYINSMLALQEAISGGADEAMMLDP--EGYVAEGSGENIFII----KDGVIYTPEVT-ACLNGITRNTILTLAAEHGFKLVEKRITRDEVYIA------DEAFFTGTAAEVTPIREV---DGR-KIGAGRRGPVTEKLQKAYFDLVSGKTEAHAEWRTLVK |
3JZ6 Chain:B ((55-351)) | ----------WHNAQVIPYGPIQLDPSAIVLHYGQEIFEGLKAYRWADGSIVSFRPEANAARLQSSAR--RLAIPELPEEVFIESLRQLIAVDEKWVPPAGGEESLYLRPFVIATEPGLGVRPSNEYRYLLIASPA-GAY-----FKGGIKPVSVWLSHEYVRASPGGTGAAKFGGNYAASLLAQAQAAEMGCDQVVWLDAIERRYVEEMGGMNLFFVFGSGGSARLVTPELSGSLLPGITRDSLLQLATDAGFAVEERKIDVDEWQKKAGAGEITEVFACGTAAVITPVSHVKHHDGEFTIADGQPGEITMALR---------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3JZ6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -75132 for 2009 contacts (-37.4/contact) +
2D Compatibility (PS) -28963 + (NN) -3027 + (LL) 3580
1D Compatibility (HY) -17200 + (ID) 4850
Total energy: -125592.0 ( -62.51 by residue)
QMean score : 0.368
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