Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
-MSFNTEVQPGICMEPDAITQEYVFNHTMLRVKDPKRSLDFYSRVLGMRLLRRLDFEEGRFSLYFLAMTRGEEVPDAVDERQRYTFGRQSVLELTHNWGSESDDS-QYHNGNQDPRGFGHICFSVPDLVAACERFETLGVNFVKPLDRG-MKNVAFISDPDGYWVEIVQASLNGEMGRG
1BH5 Chain:A ((7-182))
SGGLTDEAALSCCSDADPSTKDFLLQETMLRVKDPKKSLDFYTRVLGMTLIQKCDFPIMKFSLYFLAYEDKNDIPKEKDEKIAWALSRKATLELTHNWGTEDDETQSYHNGNSDPRGFGHIGIAVPDVYSACKRFEELGVKFVKKPDDGKMKGLAFIQDPDGYWIQILNPNKMATL---
General information:
TITO was launched using:
RESULT:
Template:
1BH5.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -79007 for 1119 contacts (-70.6/contact) +
2D Compatibility (PS) -18909 + (NN) -10041 + (LL) -244
1D Compatibility (HY) -18000 + (ID) 4400
Total energy: -130601.0 ( -116.71 by residue)
QMean score : 0.504
(partial model without unconserved sides chains):
PDB file :
Tito_1BH5.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1BH5-query.scw
PDB file :
Tito_Scwrl_1BH5.pdb
: