Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRPLLFSALLLLSGHTQASEWNDSQAVDKLFGAAGVKGTFVLYDVQRQRYVGHDRERAETRFVPASTYKVANSLIGLSTGAVRSADEVLPYGGKPQRFKAWEHDMSLRDAIKASNVPVYQELARRIGLERMRANVSRLGYGNAEIGQVVDNFWLVGPLKISAMEQTRFLLRLAQGELPFPAPVQSTVRAMTLLESGPGWELHGKTGWC---FDCTPELGWWVGWVKRNERLYGFALNIDMPGGEADIGKRVELGKASLKALGILP
2WGI Chain:B ((5-246))
---------------TENTSWN------KEFSAEAVNGVFVLCKSSSKSCATNDLARASKEYLPASTFKIPNAIIGLETGVIKNEHQVFKWDGKPRAMKQWERDLTLRGAIQVSAVPVFQQIAREVGEVRMQKYLKKFSYGNQNISGGIDKFALEGQLRISAVNQVEFLESLYLNKLSASKENQLIVKEALVTEAAPEYLVHSKTGFSGVGTESNPGVAWWVGWVEKETEVYFFAFNMDID-NESKLPLRKSIPTKIMESEGII-
General information:
TITO was launched using:
RESULT:
Template:
2WGI.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -124083 for 1921 contacts (-64.6/contact) +
2D Compatibility (PS) -25620 + (NN) -10113 + (LL) 1280
1D Compatibility (HY) -19600 + (ID) 4400
Total energy: -182536.0 ( -95.02 by residue)
QMean score : 0.568
(partial model without unconserved sides chains):
PDB file :
Tito_2WGI.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2WGI-query.scw
PDB file :
Tito_Scwrl_2WGI.pdb
: