Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTTVINRKYRISRRLGINLWGRA------KDPVNRRKYPPGQRGILGFKRLSDFGKQFAAHKKFKFYYAISSKQLRRIFLDAYNRKGYTADNFIGILESRLSSVLYHSGLVPTIYSAKQLISHKHVTVNDKIVNIPSYRVKPGDIVKIRERAAKIPVIVEAVQKQE-RKAPDYLEADSKEYSVKYLRIPQYSEVPYSADMEVNLVVEFYSR
2UUB Chain:D ((2-209))
-GRYIGPVCRLCRREGVKLYLKGERCYSPKCAMERRPYPPGQHGQKRARRPSDYAVRLREKQKLRRIYGISERQFRNLFEEASKKKGVTGSVFLGLLESRLDNVVYRLGFAVSRRQARQLVRHGHITVNGRRVDLPSYRVRPGDEIAVAEKSRNLELIRQNLEAMKGRKVGPWLSLDVEGMKGKFLRLPDREDLALPVNEQ--LVIEFYSR
General information:
TITO was launched using:
RESULT:
Template:
2UUB.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -87933 for 1514 contacts (-58.1/contact) +
2D Compatibility (PS) -20916 + (NN) -7445 + (LL) 320
1D Compatibility (HY) -15200 + (ID) 3650
Total energy: -134824.0 ( -89.05 by residue)
QMean score : 0.480
(partial model without unconserved sides chains):
PDB file :
Tito_2UUB.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2UUB-query.scw
PDB file :
Tito_Scwrl_2UUB.pdb
: