Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEKLEVGQLAPDFRLKNSDGVEISLKDLL--HKKVVLYFYPKDNTPGCTLEAKDFSALFSEFEKKNAVVVGVSPDNSQSHQKFISQCSLNVILLCDEDKKVANLYKAYGKRMLYGKEHLGIIRSTFIINTQGVLEKCFYNVKAKGHAQKVLESL
2A4V Chain:A ((61-193))
-NELEIGDPIPDLSLLNEDNDSISLKKITENNRVVVFFVYPRASTPGSTRQASGFRDNYQELKEY-AAVFGLSADSVTSQKKFQSKQNLPYHLLSDPKREFIGLLGAKKTPL------SGSIRSHFIF-VDGKLKFKRVKISPEVSVNDAKKEV
General information:
TITO was launched using:
RESULT:
Template:
2A4V.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -86685 for 1024 contacts (-84.7/contact) +
2D Compatibility (PS) -14681 + (NN) -8071 + (LL) 356
1D Compatibility (HY) -7200 + (ID) 2300
Total energy: -118581.0 ( -115.80 by residue)
QMean score : 0.602
(partial model without unconserved sides chains):
PDB file :
Tito_2A4V.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2A4V-query.scw
PDB file :
Tito_Scwrl_2A4V.pdb
: