Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --------------------------------------LTNNHYYTNDETIKHNRKTWQVMLKGFNMSFTSDNGVFSKNTVDFG---------SKLLIESFELETKI---GKILDVGCGYGPMGLTVAKAFPDSQIEMVDVNLRALELAKENAEINKITN-THIYESSVYDNVTA--NDYQAIISNPP-------------IRAGKKIVHAILEGAYDHLQETGELWIVIQKKQGGPSAEKKMEEVFGNVETV---AKDKGYFIFKSVKN |
| 1NV9 Chain:A ((15-284)) | KIWSLIRDCSGKLEGVTETSVLEVLLIVSRVLGIRKEDLFLKDLGVSPTEEKRILELVEKRASGYPLHYILGEKEFMGLSFLVEEGVFVPRPETEELVELALELIRKYGIKTVADIGTGSGAIGVSVAKF-SDAIVFATDVSSKAVEIARKNAERHGVSDRFFVRKGEFLEPFKEKFASIEMILSNPPYVKSSALFEPPEALFGGEDGLDFYREFFGRYDTSGKIVLMEIGEDQ-----VEELKKIVSDTVFLKDSAGKYRFLLLNRRSS |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1NV9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -63910 for 1408 contacts (-45.4/contact) +
2D Compatibility (PS) -21758 + (NN) -9185 + (LL) -236
1D Compatibility (HY) -7200 + (ID) 1650
Total energy: -103939.0 ( -73.82 by residue)
QMean score : 0.385
|
|
|