Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKRHFETTRRIVIKVGTSSLVQTSG--K--INLSKIDHLAFVISSLMNRGMEVILVSSGAMG--FGLDILKMDKRPQ---EISQQQAVSSVGQ-V-AMMSLYSQIFSHYQTHVSQ-ILLTR-----D---------------------------VVVFP----------------ESLQNVTNSFESL---------LSMGILPIVNENDAVSVDEMDHKTKFGDNDRLSAVVAKITKADLLIMLSDIDGLFDKNPNIYDDAVLRSHVSEITDDIIKSAGGAGSKFG-TGGMLSKIKSAQMVFDNNG-QMILMNGANPRDILKVLDGHNIGTYFAQGK |
| 2E9Y Chain:A ((4-315)) | -------GRLAVIALGGNAIAGPGMDVSVESQTAAVKRASSIIADVLADGWRSVITHGNGPQVGYLSEAFEALPPERPRQPLYIATA-MTQAWIGLLLKHSLEEELRRRGLNVLVPVVISRVLVDVSDPSFNNPSKPVGPIYGREEAEELSRRYGWVFKRDPRGGFRRVVPSPRPVSIVDR-DLIAEASAESPAVVALGGGGVPVVER---PGGVLE-PVEAVVDKDLASSLLATQLNADLLVILTDVPGVAVNYGR--EGERWLRRAAASE--LKKYL---REGHFPPGSMGPKVEAAISFVERTGKPAVIGSLEEARQV---LSLQ-AGTVVMLG- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2E9Y.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -135814 for 1883 contacts (-72.1/contact) +
2D Compatibility (PS) -26307 + (NN) -10927 + (LL) 984
1D Compatibility (HY) -5600 + (ID) 1850
Total energy: -179514.0 ( -95.33 by residue)
QMean score : 0.439
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