Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSDIKILALDLDGTLFTTD-KKVSEENKVALKAAREKGIKVVITTGRPLKAIGNLLEDLELVSDEDYSITFNGGLVQQNTGKILAKTAMTRQEVEDIHEELYQVGLPTDILSEGTVYSIANKGHHSQYH---LAN---PLLEFIEVDDLEQVPKDVVYNKIVSVIDATYLDQQIAKLPDRLKVDYEMFKSRDIILELMPKGVHKAVGLELLTKHLGLDSSQVMAMGDEANDLSMLEWAGLGVAMANGIPEAKAIAKATTICNNDESGVAEAIGKYILSEEN |
| 2RBK Chain:A ((1-260)) | --MTKALFFDIDGTLVSFETHRIPSSTIEALEAAHAKGLKIFIATGRPKAIINNLSELQD-RNLIDGYITMNGAYCFVG-EEVIYKSAIPQEEVKAMAAFCEKKGVPCIFVEEHNISVCQPNEMVKKIFYDFLHVNVIPTVSFEEASN-KEVIQMTPFI--TE-------EEE-KEVLPSIP-TCEIGRWYPAFADVTAKGDTKQKGIDEIIRHFGIKLEETMSFGDGGNDISMLRHAAIGVAMGQAKEDVKAAADYVTA-PIDEDGISKAMKHFGII--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2RBK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -61698 for 2282 contacts (-27.0/contact) +
2D Compatibility (PS) -27858 + (NN) -12518 + (LL) 2268
1D Compatibility (HY) -10400 + (ID) 3400
Total energy: -113606.0 ( -49.78 by residue)
QMean score : 0.500
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