Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKFYLVRHGKTQWNLEGRFQGANGDSPLLEEAIEELEELGQYLSSIHFDAVYSSDLGRARDTVNILNDANSCPKEIHYTPQLREWALGTLEGCKIATMQAIYPRQMTAFYQNPLQFKHDMFGAESLYQTTHRVESFLRSLASK-NYDKVLIVGHGANLTASIRSLLGYQYGSLHYKD-KLDNASLTIIETHDFKDFNCLTWNDKSYLRQEVKMTH
1H2E Chain:A ((2-206))
TTLYLTRHGETKWNVERRMQGW-QDSPLTEKGRQDAMRLGKRLEAVELAAIYTSTSGRALETAEIVRGGRLIP--IYQDERLREIHLGDWEGKTHDEIRQMDPIAFDHFWQAPHLYAP--QRGERFCDVQQRALEAVQSIVDRHEGETVLIVTHGVVLKTLMAAFKDTPLDHL-WSPPYMYGTSVTIIEVDG-GTFHVAVEGDVSHIEEVKEV--
General information:
TITO was launched using:
RESULT:
Template:
1H2E.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -78394 for 1663 contacts (-47.1/contact) +
2D Compatibility (PS) -21690 + (NN) -3976 + (LL) 656
1D Compatibility (HY) -10000 + (ID) 3000
Total energy: -116404.0 ( -70.00 by residue)
QMean score : 0.467
(partial model without unconserved sides chains):
PDB file :
Tito_1H2E.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1H2E-query.scw
PDB file :
Tito_Scwrl_1H2E.pdb
: