Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSGNEVHPDLRRIAVVTPRQLVGPRTLPVMRALIVVAGLRMSRTPPDIEVLTLESGVGVRLYRPAGSNEPAPALLWIHAGGYVMGTAQQDDRLCLRFSSRLGITVASVDYRLAPENPYPAALGDCYSALTWLASLP---AVDPARVAIGGASAGGGLAAALALLARDRGGITPAFQLLVYPMLDDRPSIAPA-NPHYRLWNGRANRFGWRAYLGDA-DARVAVPGRRDDLGGLAPAWIGVGTHDLLHDEDLAYAERLTAAGVPCQVEVVEGAFHGFDRVAPNVGVSQRFFTSQCNSLRAALALSNRT |
| 3QH4 Chain:A ((68-312)) | -------------------------------------------------------PVPVRIYRAAP--TPAPVVVYCHAGGFALGNLDTDHRQCLELARRARCAVVSVDYRLAPEHPYPAALHDAIEVLTWVVGNATRLGFDARRLAVAGSSAGATLAAGLAHGAADGSLPPVIFQLLHQPVLDDRPTASRSEFRATPAFDGEAASLMWRHYLAGQTPSPESVPGRRGQLAGLPATLITCGEIDPFRDEVLDYAQRLLGAGVSTELHIFPRACHGFDSLLPEWTTSQRLFAMQGHALADAFY----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3QH4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -156519 for 2180 contacts (-71.8/contact) +
2D Compatibility (PS) -26501 + (NN) -18894 + (LL) 4260
1D Compatibility (HY) -17200 + (ID) 5150
Total energy: -220004.0 ( -100.92 by residue)
QMean score : 0.524
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