Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRNLFALTPMALALCTASAAWADEGEAKEGFIEGSSLQLLTRNYYFNHDRRHASGHDSKEWAQGFIATFQSGYTPGVVGFGVDAYGMLGLK--LDGGGGTGGTSILPITSPSKEGYESGKAPDEFSSGG-AALKIRAFDTELKLGDQFLSNPVVAGGESRMLPQTFRGVSLTNNSFEDLTLTAGQVSFTKYYNQSGHRRLGSYYGELPGDRDSHHLSWLGGTWGGIEGFTSSLYAAELQNVWKQYYADVDYTYEIDDNWSLNPGAHYYKTVDSGDSLLGRIDNNTYSLHFAVGYRQHTVTAVLQKVNGNTPFDY----INQGDSIFLDNSQQYSDFNGPNEKSWKLQYDYDFVALGLPGLSASASYSRGK-LDLTRVDPDSPGYGGWYSADGKNAKHWERDLDLQYVVQGGPAKDLSLRLRWATHRGTGGYSAVDNDIDEYRVIVDYPIDVF |
| 3SY7 Chain:A ((3-420)) | --------------------FVSDQAEAKGFIEDSSLDLLLRNYYFNRD-------DRVDWTQGFLTTYESGFTQGT--VGFGVDAFGYLGLKLDGT-------------------------DDYSRAGGA-VKVRISKTMLKWGEMQPTAPVFAAGGSRLFPQTATGVQLQSSEFEGLDLEAGHFTE----------ELYATYA----GETAKSADFIGGRYAITDNLSASLYGAELEDIYRQYYLNSNYTIPLASDQSLGFDFNIYRTNDEGKAKAGDISNTTWSLAAAYTLDAHTFTLAYQKVHGDQPFDYIGFGGAGGDSIFLANSVQYSDFNGPGEKSWQARYDLNLASYGVPGLTFMVRYINGKDIDGTKMSDNN--VGYKNYGYGEDGKHHETNLEAKYVVQSGPAKDLSFRIRQAWHRANADQ--GEGDQNEFRLIVDYPLSIL |
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General information:
TITO was launched using:
| RESULT:
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Template: 3SY7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 34701 for 2995 contacts (11.6/contact) +
2D Compatibility (PS) -39123 + (NN) -8040 + (LL) 2328
1D Compatibility (HY) -25600 + (ID) 7950
Total energy: -43684.0 ( -14.59 by residue)
QMean score : 0.215
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