Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MQTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPKTPFLLVGTQIDLRDDPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVFDEAILAALEPPEPKKSRRCVLL
2IC5 Chain:A ((2-178))
MQAIKCVVVGDGAVGKTCLLISYTTNAFPGEYIP--FDNYSANVMVDGKPVNLGLWDTAGQEDYDRLRPLSYPQTDVFLICFSLVSPASFENVRAKWYPEVRHHCPHTPILLVGTKLDLRDDKDTIERLRDKKLAPITYPQGLAMAREIGSVKYLECSALTQRGLKTVFDEAIRAVL--------------
General information:
TITO was launched using:
RESULT:
Template:
2IC5.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -140119 for 1425 contacts (-98.3/contact) +
2D Compatibility (PS) -18823 + (NN) -8998 + (LL) 932
1D Compatibility (HY) -24400 + (ID) 6300
Total energy: -197708.0 ( -138.74 by residue)
QMean score : 0.744
(partial model without unconserved sides chains):
PDB file :
Tito_2IC5.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2IC5-query.scw
PDB file :
Tito_Scwrl_2IC5.pdb
: