Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTEYKLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTGEGFLCVFAINNTKSFEDIHHYREQIKRVKDSEDVPMVLVGNKCDLP-SRTVDTKQAQDLARSYGIPFIETSAKTRQRVEDAFYTLVREIRQYRLKKISKEEKTPGCVKIKKCIIM
2BOV Chain:A ((12-181))
LALHKVIMVGSGGVGKSALTLQFMYDEFVEDYEPTKADSYRKKVVLDGEEVQIDILDTAGQEDYAAIRDNYFRSGEGFLCVFSITEMESFAATADFREQILRVKEDENVPFLLVGNKSDLEDKRQVSVEEAKNRAEQWNVNYVETSAKTRANVDKVFFDLMREIRARKME--------------------
General information:
TITO was launched using:
RESULT:
Template:
2BOV.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -90662 for 1351 contacts (-67.1/contact) +
2D Compatibility (PS) -18762 + (NN) -9442 + (LL) 1632
1D Compatibility (HY) -18400 + (ID) 4450
Total energy: -140084.0 ( -103.69 by residue)
QMean score : 0.521
(partial model without unconserved sides chains):
PDB file :
Tito_2BOV.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2BOV-query.scw
PDB file :
Tito_Scwrl_2BOV.pdb
: