Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTEYKLVVVGAGGVGKSALTIQLIQNHFV--DEYDPTIEDSYRKQVVIDGETCLLDILDTAGQE-EYSAMRDQYMRTGEGFLCVFAINNSKSFADINLYREQIKRVKDSDDVPMVLVGNKCDLP-TRTVDTKQAHELAKSYGIPFIETSAKTRQGVEDAFYTLVREIRQYRMKKLNSSDDGTQGCMGLPCVVM
2G3Y Chain:A ((36-204))
-TYYRVVLIGEQGVGKSTLANIFAGVHDSMDSD---LGEDTYERTLMVDGESATIILLDMWENKGENEWLHDHCMQVGDAYLIVYSITDRASFEKASELRIQLRRARQTEDIPIILVGNKSDLVRCREVSVSEGRACAVVFDCKFIETSAAVQHNVKELFEGIVRQVRLR-----------------------
General information:
TITO was launched using:
RESULT:
Template:
2G3Y.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -89679 for 1249 contacts (-71.8/contact) +
2D Compatibility (PS) -18044 + (NN) -8830 + (LL) 1012
1D Compatibility (HY) -12000 + (ID) 2700
Total energy: -130241.0 ( -104.28 by residue)
QMean score : 0.560
(partial model without unconserved sides chains):
PDB file :
Tito_2G3Y.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2G3Y-query.scw
PDB file :
Tito_Scwrl_2G3Y.pdb
: