Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGVEIETISPGDGRTFPKKGQTCVVHYTGMLQNGKKFDSSRDRNKPFKFRIGKQEVIKGFEEGAAQMSLGQRAKLTCTPDVAYGATGHPGVIPPNATLIFDVELLNLE
3O5Q Chain:A ((20-126))
-GVLKIVKRVGNGEETPMIGDKVYVHYKGKLSNGKKFDSSHDRNEPFVFSLGKGQVIKAWDIGVATMKKGEICHLLCKPEYAYGSAGSLPKIPSNATLFFEIELLDFK
General information:
TITO was launched using:
RESULT:
Template:
3O5Q.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -55102 for 784 contacts (-70.3/contact) +
2D Compatibility (PS) -11598 + (NN) -3658 + (LL) 208
1D Compatibility (HY) -8000 + (ID) 2550
Total energy: -80700.0 ( -102.93 by residue)
QMean score : 0.575
(partial model without unconserved sides chains):
PDB file :
Tito_3O5Q.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3O5Q-query.scw
PDB file :
Tito_Scwrl_3O5Q.pdb
: