Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
GSHMLEMRIGHGFDVHAFGGEGPIIIGGVRIPYEKGLLAHSDGDVALHALTDALLGAAALGDIGKLFPDTDPAFKGADSRELLREAWRRIQAKGYTLGNVDVTIIAQAPKMLPHIPQMRVFIAEDLGCHMDDVNVKATTTEKLGFTGRGEGIACEAVALLIKATK
2UZH Chain:A ((5-159))
-----LPRVGLGTDVHPIEAGRPCRLLCLEFDDADGCA--SDGDVAAHALCDALLSAAGLGDLGTIFGTDRPQWRGASGADMIRHVRGLVENAGFVIGNATVQVIGNRPKVGPRREEAQQVLSELVGAP---VSVSATTTDGLGLTGRGEGLAAIATALVAAE--
General information:
TITO was launched using:
RESULT:
Template:
2UZH.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -116699 for 1265 contacts (-92.3/contact) +
2D Compatibility (PS) -17122 + (NN) -11040 + (LL) 588
1D Compatibility (HY) -8000 + (ID) 3000
Total energy: -155273.0 ( -122.75 by residue)
QMean score : 0.638
(partial model without unconserved sides chains):
PDB file :
Tito_2UZH.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2UZH-query.scw
PDB file :
Tito_Scwrl_2UZH.pdb
: