Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ----------------MDRRMWGAHVFCVLSPLPTVLGHMHPECDFITQLREDESACLQAA---EEMPNTTLGCPATWDG--------LLCWPTAGSGEWVTLPCPDFFSHFSSESGAVKRDCTITGWSEPFPPYPVACPVPLELLAEEESYFSTV--KIIYTVGHSISIVALFVAITILVALRRLHCPRNYVHTQLFTTFILKAGAVFLKDAALFHSDDTDHCSFSTVLCKVSVAASHFATMTNFSWLLAEAVYLNCLLASTSPSS-----RRAFWWLVLAGWGLPVLFTGTWVSCKLAFEDIACWDLDDTSPY-WWIIKGPIVLSVGVNFGLFLNIIRILVRKLEPAQGSLHTQSQYWRLSKSTLFLIPLFGIHYIIFNFLPDNAGLGIRLPLELGLGSFQGFIVAILYCFLNQEVRTEISRKWHGHDPELLPAWRTRAKWTTPSRSAAKVLTSMC |
| 4K5Y Chain:A ((13-423)) | HYHVAAIINYLGHCISLVALLVAFVLFLRARSIRCLRNIIHANLIAAFILRNATWFVVQLTMSPEVHQSNVGWCRLVTAAYNYFHVTNFFWMFGEGCYLHTAIVLTNIFEMLRIDEGL-----RLKIYKDTEGYYTIGIGHLLTKSPSLSVAKSELDKAIGRNSNGVITKDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRSALINMVFQMGETGVAGFTNSLRMLQQKRWDEAAVNLAKSRWYNQTPNRAKRVIATFRTGTWDAYDRLRAWMFICIGWGVPFPIIVAWAIGKLYYDNEKCWAGKRPGVYTDYIYQGPMALVLLINFIFLFNIVRILMTKLRASTTSETIQAR--KAVKATLVLLPLLGITYMLAF--VNEVSRVVFIYFNAFLESFQGFFVSVFACFLNS------------------------------------------ |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4K5Y.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -223291 for 2632 contacts (-84.8/contact) +
2D Compatibility (PS) -37758 + (NN) -9940 + (LL) 3888
1D Compatibility (HY) -18000 + (ID) 3400
Total energy: -288501.0 ( -109.61 by residue)
QMean score : 0.067
|
|
|