Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MPTQRDSSTMSHTVAGGGSGDHSHQVRVKAYYRGDIMITHFEPSISFEGLCNEVRDMCSFDNEQLFTMKWIDEEGDPCTVSSQLELEEAFRLYELNKDSELLIHVFPCVPERPGMPCPGEDKSIYRRGARRWRKLYCANGHTFQAKRFNRRAHCAICTDRIWGLGRQGYKCINCKLLVHKKCHKLVTIECGRHSLPQEPVMPMDQSSMHSDHAQTVIPYNPSSHESLDQVGEEKEAMNTRESGKASSSLGLQDFDLLRVIGRGSYAKVLLVRLKKT-DRIYAMKVVKKELVN-DDEDIDWVQTEKHVFEQ-ASNHPFLVGLHSCFQTES-RLFFVIEYVNGGDLMFHMQRQ-RKLPEEHARFYSAEISLALNYLHER-GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTS--TFCGTPNYIAPEILRGE---DYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNP----DQNTEDYLFQVILEKQIRIP-RSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRNVD---WDMMEQKQVVPPFKPNISGEFGLDNFDSQFTNEPVQLTPDDDDIVRKIDQSEFEGFEYINPLLMSAEECV |
| 1CDK Chain:A ((8-350)) | --------------------------------------------------------------------KGSEQESVKEFLAKAKEDFLKKWENPAQNTA------H------------------------------------------------------------------------LDQFERIKTLGT----------------------------------------------------------------------G--SFGRVMLVKHKETG-NHFAMKILDKQKVVK-LKQIEHTLNEKRILQAV--NFPFLVKLEYSFKDN-SNLYMVMEYVPGGEMFSHLRR-IGRFSEPHARFYAAQIVLTFEYLHS-LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-K--G--RTWTLCGTPEYLAPEIILS-KGY--NKAVDWWALGVLIYEMAAG---------Y-PPFFAD---QPIQIYEKIVSGKVRFPS-HFSSDLKDLLRNLLQVDLTKRFGNLKDG-VNDIKNHKWFA---TTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEEEIRVSI-------NEKCGKEFSEF-------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1CDK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -152146 for 2565 contacts (-59.3/contact) +
2D Compatibility (PS) -35674 + (NN) -20887 + (LL) 13080
1D Compatibility (HY) -22000 + (ID) 5600
Total energy: -223227.0 ( -87.03 by residue)
QMean score : 0.443
|
|
|