Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MEYMSTGSDNKEEIDLLIKHLNVSDVIDIMENLYASEEPAVYEPSLMTMCQDSNQNDERSKSLLLSGQEVPWLSSVRYGTVEDLLAFANHISNTAKHFYGQRPQESGILLNMVITPQNGRYQIDSDVLLIPWKLTYRNIGSDFIPRGAFGKVYLAQDIKTKKRMACKLIPVDQFKPS-----DVEIQACFRHENIAELYGAVLWGETVHLFMEAGEGGSVLEKLES-CGPMREFE--IIWVTKHVLKGLDFLHSKKVIHHDIKPSNIVFMSTKAVL--VDFGLSVQMTEDVYFPKDLRGTEIYMSPEVI--LCRGHSTKADIYSLGATLIHMQTGTPPWVK-RYPRSA-YPSYLYIIHKQAPPLEDIADDCSPGMRELIEASLERNPNHRPRAADLLKHEAL--NPPREDQPRCQSLDSALLERKRLLSRKELELPENIADSSCTGSTEESEMLKRQRSLYIDLGALAGYFNLVRGPPTLEYG |
| 2CLQ Chain:B ((32-284)) | -------------------------------------------------------------------------------------------------------------------------------------------------KGTYGIVYAGRDLSNQVRIAIKEIPER----SQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLA--------FTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFKVHPEIP------ESMSAEAKAFILKCFEPDPDKRACANDLLVDEFLKV------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2CLQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -89708 for 1747 contacts (-51.3/contact) +
2D Compatibility (PS) -23200 + (NN) -5424 + (LL) 14184
1D Compatibility (HY) -17600 + (ID) 4100
Total energy: -125848.0 ( -72.04 by residue)
QMean score : 0.428
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