Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MEIILAEPRGFCAGVKRAVDILAITLKKYRNKRKVYVLHEIVHNKYIVEDFKRQGVIFVNSIRDIKDNRGILIFSAHGVSKNIEDKAKRKGIQVIDATCPLVSKVHKEAKRYEDSGKELILIGHKNHPEVKGIRGRVN---NPIVLVQTLQNVRDLKVKNPDNLSYVTQTTLSTDDTREIITALKLRFPNITGPNLKDICYATQNRQNAVKKLTEIVDIVLIIGSKNSSNSNRLLDLCTARGKRAYLIDNYSYMDKSWLQGIEKIGITAGASAPDILVDELINHLKINVNTKVSVMSDGVTENVQFKIPHLV |
3DNF Chain:A ((2-281)) | VDIIIAEHAGFCFGVKRAVKLAEESLKE-S-QGKVYTLGPIIHNPQEVNRLKNLGVFPSQ-GEEFKE-GDTVIIRSHGIPPEKEEALRKKGLKVIDATCPYVKAVHEAVCQLTREGYFVVLVGEKNHPEVIGTLGYLRACNGKGIVVETLEDIGEAL--KHERVGIVAQTTQNEEFFKEVVGEIALWVKE--VKVINTICNATSLRQESVKKLAPEVDVMIIIGGKNSGNTRRLYYISKELNPNTYHIETAEELQPEWFRGVKRVGISAGASTPDWIIEQVKSRIQEI------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3DNF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -156026 for 2271 contacts (-68.7/contact) +
2D Compatibility (PS) -29390 + (NN) -7295 + (LL) 2184
1D Compatibility (HY) -22400 + (ID) 4800
Total energy: -217727.0 ( -95.87 by residue)
QMean score : 0.623
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