Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLKKIIISFSIALLLIFCFFIFFKGESPLEINISYINFYVKSKIS-KTFANSDVDIGSTSVILQK-DGKDPYLVITN---LKIVNSGFIIEAPNLFVHFKLS------SLFRANVKI-------SQVLADSVCAYVDQEKA----GFKVVDFD----LKNSLKAVREFFFDLNTGSRIEITNIAINKSTEGELFID--ELYIGKREDFNVLDIRVHTKD--EKGFLDDLSITIKNRNGLLNVYGIFYNLKLKLFSEFSTLI-----KNYNLGKNIGFKG-NFSMRISGKNEIID-------GNVYILNTE-NRVNKNLAITNVNINLTYSDGVI-GVKNFHFN---LNGTYLSL-MGKMNFSANHALFRVNIS-KFAAKDLCTYV-PDYIINS--EFKSWYCDNIDGNILNVIVSFNGKINNLINND-----LSDVIVVADIENGSVKFDEDFEQVRELSGDLVLKNDSLKITVNSAKFQNFTINGCNIEMNSLDREDSVLTINGQAVSDAYGLYEPIKFKLD---DVIKVEKNKIGGAAKSVFNFRVFNINADDKEV-NFSAKFHSEIDNLVIYDANLGRYDIKLD-FGSDFIDLNG-SGIVNNTQLLFDLKSSNKNESFTWSLTGDLPAQILNFNGGYFNANIESVINQDKTGYVNGNVDLSEFELRSSYLGWKNRFEDHNKILFSVKLKGANRLLIDRLDVIGSD---LDIKFS-GRVENGDLYLNTSSFKLPNNDLSIEIKSSKGKNIINVCGEKINLSDVLDLLGKNDSGLSNNVE-------VSMNVDNVIMKEGIVIKDASLNIS-CTKGNCNGSQFTGQFLEDNSNILAEYSEIGLEIHADNSGMLLRSLG---ISKSVKNGKLSFYLSPQRESGEHYGMLSIGNF-YIKDAPLLT---------TLLSMSSLPGIVNTI-KNEGVYFYKYNAPFSHKDGTVEIEE-------------SWLEGAELGISTSGKLDIRGYKFQVEGQVIPAYSINKSLLKIPIV-GKLLTGGKSR-GIISIDYKASGDDKNSNIFVNFISSLTPSLLKRLLGVFDRAMTKANEAITNSLKGGMKKKFSSV |
| 3W5N Chain:A ((3-1031)) | AL--RVTSPSVE---------YVQRPLGLDAAHPRLSWPMASAAPGRRQSAYQVRVASSAAGLSHPDVWDSGKVVSDDSVLVPYAGPPLKPRTRYFWSVRVWDADGGASEWSAPSWWETGLMGASQWSAKWISAPAPLTEAPSLEGSSWIWFPEGEPANSAPAATRWFRRTVDLPDDITGATLAISADNVYAVSVDGAEVARTDLEADNEGWRRPAVIDVLDHVHSGNNTLAVSASNASVGPAGWICVLVLTTASGEKKIFSDASWKSTDHEPADGWREPDFDDSGWPAAKVAAAWGAGPWGRVAPVASAANQLRHEFRLPHKKVSRARLYATALGLYEAHLNGRRVGRDQLAPGWTDYRKRVQYQTYDVTSSVRPGANALAAYVAPGWYAGNVGMFGPHQYGERPALLAQLEVEYADGTSERITSGPDWRAASGPIVSADLLSG-ETYDARKETAGWTSPGF---DDRAWLAVRGADNDVPE--------QIVAQVDGPVRIAKELPARKVTEPKPGVFVLDLGQNMVGSVRLRVSGDAGTTVRLRHAEVLNPDGTIYTANLRSAAATDTYTLKGQGEETYEPRFTFHGFRYVEVTGFPGKPSTTSVTGRVMHTSAPFTFEFET-----------NVPMLNKLHSNITWGQRGNFLSVPTDTPARDERLGWTGDINVFAPTAAYTME-SARFLTKWLVDLRDAQTSDGAFTDVAPAVGNLGNGVAGWGDAGVTVPWALYQAY----GDRQVLADALPSVH--AWLRYLEKHSDGLLRPADGYGDWLNVSDETPKDVIATAYFAHSADLAARMATELGKDAAPYTDLFTRIRKAFQTAYVASDGKVKGDTQSAYVLTLSMNLVPDALRKAAADRLVALIEAKDWH---LSTGFLGTPRLLPVLTDTGHTDVAYRLLHQRTFPSWGYPIDKGSTTMWERWDSIQP--DGGFQTPEMNSFNHYAYGSVGEWMYANIAGIAPGRA----GYR-QVVIRPRPGGEVTSARATFASLHGPVSTRWQQRSGGFVLTCSVP---PNTTAEV-WIPADHPDRVQHTHGTFVRAE---DGCAVFEVGSG-SHRFTVK |
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General information:
TITO was launched using:
| RESULT:
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Template: 3W5N.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -18085 for 7684 contacts (-2.4/contact) +
2D Compatibility (PS) -96163 + (NN) 8742 + (LL) 4288
1D Compatibility (HY) -4800 + (ID) 7850
Total energy: -113868.0 ( -14.82 by residue)
QMean score : 0.194
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